Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908637.1_cds_XP_016458794.1_52389
CDS Infomation

[gene=LOC107782423] [db_xref=GeneID:107782423] [protein=vicilin-like seed storage protein At2g28490] [protein_id=XP_016458794.1] [location=join(1052..1376,1925..2106,2236..2316,2770..3204,3830..4339)] [gbkey=CDS]
Sequence

ATGGGAAACAGAAAGGATCTTTTGATCTTATTGCTGGTGATTTCCTCTGCTCTTGTGGCT
TCTGTTAGTGGTTATGAATATGACAGAAGAGGGAAAGAGATGGAAGAAGAAGAAGAGGAA
AGTGAAAGTGGATGGTTTTTATTGCATGATTCAAAGGAAATAGTGAGGACTGATGCTGGA
GTTATGAGAGTGGTGAGAGGTGGATTTGGTGGTGGGATTTCTATGTTTCAAAGTCCAATG
CATATTGGTTTTATTACTATGGAACCTAACAGTCTTTTCATCCCTCAGTATCTTGATTCT
CATCTCACCCTCTTTGTTCGCCGAGGGGAAACAAGAATTGGGCACATATACAAAGATGAT
TTTACAGAAAGGCGATTGAAGGAAGGAGATGTGTACAGCATTCGAGCTGGCTCTGCTTTC
TATCTTGTTAATCCAGCTGAGGGACAGAGACTTCACATCATTTGCAGCATTAGCACCTCT
AGCAGCTTAGGATGGCTCGGTTTCCAGTCTTTCTTCATTGGTGGTGGAATGTATCCAACA
TCTGTACTTGCTGGTTTCGACACTCTGACATTATCGACAGCATTCAATGTATCCACAGCA
GAAGTGAGTGAGATCTTGACAAGACAATATTCAGGTGCAATTGTATATCTGAACACTACA
CATTCTCCTACACCGAGCATATGGGCTACATTCTTGAACCTAGAACAACACCAGAAACTT
GAACACCTAAAGAGAATTGTGCATTTGGAGGAAGAAGCTAGCCAAGAAGAAGAAGAGGAA
AAAGAGCAGCCAATATGGTCTTTGAGAAAGTTCTTGACTAATCTTTTTGGTAATGAAAGA
AACAGGAGAGAGGGGAGGAAAGGCGACGACAGACGAAGAGGCAAAGGTCCAGACTCCTAC
AATCTTTTTGACAGAAAGGCAGATTATAAGAATGACTATGGGTGGAGCTTGGCCTTAGAT
CAATCTGATTATTCTCCATTGAAGCATGCTGACATTGGCGTCTATCTTGTCAATCTTTCA
GCGGGAGCTATGATGGCACCTCACATTAATCCAACAGCAACAGAATATGGAATAGTGTTA
AGAGGAAGTGGCAGTATCCAAATTGTGTATCCAAACGGTACACTAGCAATGAACTCGAGA
GTAAACGAAGGAGATGTGTTTTGGGTGCCAAGGTACTTCCCCTTCTGTCAAATTGCATCA
AGAACCGGACCATTCGAGTTCTTCGGTTTCACAACAACAGCAAAAAAGAACAGGCCACAG
TTCTTGGTAGGTCAGAATTCAATACTACAAAGCATGAGAGGACCTGAATTTGCAGCTGCA
TTTGGTGTTAGCGAAGAGAGGCTTAGGAGAATATTGGATGCTCAGCGTGAAGCTGTTATT
TTGCCGTCGGCGGCCGTTGCTCCGACAGAGCCGATTGATCCGAGAGAGGAGGAGGAAGAA
AGAGGAGAGAGAGGGAGAGAGCAGGAGATTGTAATGAAAATACCAGAAGTGATTAGGAGC
TTTGGCAATGACATGATCATGGGATTTGCTTAG

Peptide Sequence

PEP ID

XP_016458794.1
PEP Infomation

PREDICTED: vicilin-like seed storage protein At2g28490 [Nicotiana tabacum]
Sequence

MGNRKDLLILLLVISSALVASVSGYEYDRRGKEMEEEEEESESGWFLLHDSKEIVRTDAG
VMRVVRGGFGGGISMFQSPMHIGFITMEPNSLFIPQYLDSHLTLFVRRGETRIGHIYKDD
FTERRLKEGDVYSIRAGSAFYLVNPAEGQRLHIICSISTSSSLGWLGFQSFFIGGGMYPT
SVLAGFDTLTLSTAFNVSTAEVSEILTRQYSGAIVYLNTTHSPTPSIWATFLNLEQHQKL
EHLKRIVHLEEEASQEEEEEKEQPIWSLRKFLTNLFGNERNRREGRKGDDRRRGKGPDSY
NLFDRKADYKNDYGWSLALDQSDYSPLKHADIGVYLVNLSAGAMMAPHINPTATEYGIVL
RGSGSIQIVYPNGTLAMNSRVNEGDVFWVPRYFPFCQIASRTGPFEFFGFTTTAKKNRPQ
FLVGQNSILQSMRGPEFAAAFGVSEERLRRILDAQREAVILPSAAVAPTEPIDPREEEEE
RGERGREQEIVMKIPEVIRSFGNDMIMGFA

Transcript Sequence

Gene sequence data has not been registered.